The biology/emboss port
EMBOSS-6.0.1p5 – European Molecular Biology Open Software Suite (cvsweb github mirror)
Description
EMBOSS is "The European Molecular Biology Open Software Suite". EMBOSS is a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web. Also, as extensive libraries are provided with the package, it is a platform to allow other scientists to develop and release software in true open source spirit. EMBOSS also integrates a range of currently available packages and tools for sequence analysis into a seamless whole. EMBOSS breaks the historical trend towards commercial software packages.WWW: http://emboss.open-bio.org/
Maintainer
The OpenBSD ports mailing-list
Categories
Files
- /usr/local/include/ajacd.h
- /usr/local/include/ajalign.h
- /usr/local/include/ajarch.h
- /usr/local/include/ajarr.h
- /usr/local/include/ajassert.h
- /usr/local/include/ajax.h
- /usr/local/include/ajbase.h
- /usr/local/include/ajcall.h
- /usr/local/include/ajcod.h
- /usr/local/include/ajdan.h
- /usr/local/include/ajdefine.h
- /usr/local/include/ajdmx.h
- /usr/local/include/ajdom.h
- /usr/local/include/ajdomain.h
- /usr/local/include/ajexcept.h
- /usr/local/include/ajfeat.h
- /usr/local/include/ajfeatdata.h
- /usr/local/include/ajfile.h
- /usr/local/include/ajfiledata.h
- /usr/local/include/ajfileio.h
- /usr/local/include/ajfmt.h
- /usr/local/include/ajgraph.h
- /usr/local/include/ajgraphstruct.h
- /usr/local/include/ajgraphxml.h
- /usr/local/include/ajhist.h
- /usr/local/include/ajindex.h
- /usr/local/include/ajjava.h
- /usr/local/include/ajlist.h
- /usr/local/include/ajmath.h
- /usr/local/include/ajmatrices.h
- /usr/local/include/ajmem.h
- /usr/local/include/ajmess.h
- /usr/local/include/ajnam.h
- /usr/local/include/ajnexus.h
- /usr/local/include/ajpat.h
- /usr/local/include/ajpdb.h
- /usr/local/include/ajpdbio.h
- /usr/local/include/ajphylo.h
- /usr/local/include/ajrange.h
- /usr/local/include/ajreg.h
- /usr/local/include/ajreport.h
- /usr/local/include/ajseq.h
- /usr/local/include/ajseqabi.h
- /usr/local/include/ajseqdata.h
- /usr/local/include/ajseqdb.h
- /usr/local/include/ajseqread.h
- /usr/local/include/ajseqtype.h
- /usr/local/include/ajseqwrite.h
- /usr/local/include/ajsort.h
- /usr/local/include/ajstr.h
- /usr/local/include/ajsys.h
- /usr/local/include/ajtable.h
- /usr/local/include/ajtime.h
- /usr/local/include/ajtranslate.h
- /usr/local/include/ajtree.h
- /usr/local/include/ajutil.h
- /usr/local/include/ajvector.h
- /usr/local/include/embaln.h
- /usr/local/include/embcom.h
- /usr/local/include/embcons.h
- /usr/local/include/embdata.h
- /usr/local/include/embdbi.h
- /usr/local/include/embdmx.h
- /usr/local/include/embdomain.h
- /usr/local/include/embest.h
- /usr/local/include/embexit.h
- /usr/local/include/embgroup.h
- /usr/local/include/embiep.h
- /usr/local/include/embindex.h
- /usr/local/include/embinit.h
- /usr/local/include/embmat.h
- /usr/local/include/embmisc.h
- /usr/local/include/embmol.h
- /usr/local/include/embnmer.h
- /usr/local/include/emboss.h
- /usr/local/include/embpat.h
- /usr/local/include/embpatlist.h
- /usr/local/include/embpdb.h
- /usr/local/include/embprop.h
- /usr/local/include/embread.h
- /usr/local/include/embshow.h
- /usr/local/include/embsig.h
- /usr/local/include/embword.h
- /usr/local/include/eplplot/
- /usr/local/include/eplplot/disptab.h
- /usr/local/include/eplplot/drivers.h
- /usr/local/include/eplplot/metadefs.h
- /usr/local/include/eplplot/pdf.h
- /usr/local/include/eplplot/plConfig.h
- /usr/local/include/eplplot/plDevs.h
- /usr/local/include/eplplot/plcore.h
- /usr/local/include/eplplot/pldebug.h
- /usr/local/include/eplplot/pldll.h
- /usr/local/include/eplplot/plevent.h
- /usr/local/include/eplplot/plfci-type1.h
- /usr/local/include/eplplot/plhershey-unicode.h
- /usr/local/include/eplplot/plplot.h
- /usr/local/include/eplplot/plplotP.h
- /usr/local/include/eplplot/plstrm.h
- /usr/local/include/eplplot/plunicode-type1.h
- /usr/local/include/eplplot/plxwd.h
- /usr/local/include/eplplot/ps.h
- /usr/local/lib/libajax.a
- /usr/local/lib/libajax.la
- /usr/local/lib/libajax.so.1.0
- /usr/local/lib/libajaxg.a
- /usr/local/lib/libajaxg.la
- /usr/local/lib/libajaxg.so.1.0
- /usr/local/lib/libeplplot.a
- /usr/local/lib/libeplplot.la
- /usr/local/lib/libeplplot.so.0.0
- /usr/local/lib/libnucleus.a
- /usr/local/lib/libnucleus.la
- /usr/local/lib/libnucleus.so.1.0
- /usr/local/libexec/emboss/
- /usr/local/libexec/emboss/aaindexextract
- /usr/local/libexec/emboss/abiview
- /usr/local/libexec/emboss/acdc
- /usr/local/libexec/emboss/acdpretty
- /usr/local/libexec/emboss/acdtable
- /usr/local/libexec/emboss/acdtrace
- /usr/local/libexec/emboss/acdvalid
- /usr/local/libexec/emboss/aligncopy
- /usr/local/libexec/emboss/aligncopypair
- /usr/local/libexec/emboss/antigenic
- /usr/local/libexec/emboss/backtranambig
- /usr/local/libexec/emboss/backtranseq
- /usr/local/libexec/emboss/banana
- /usr/local/libexec/emboss/biosed
- /usr/local/libexec/emboss/btwisted
- /usr/local/libexec/emboss/cai
- /usr/local/libexec/emboss/chaos
- /usr/local/libexec/emboss/charge
- /usr/local/libexec/emboss/checktrans
- /usr/local/libexec/emboss/chips
- /usr/local/libexec/emboss/cirdna
- /usr/local/libexec/emboss/codcmp
- /usr/local/libexec/emboss/codcopy
- /usr/local/libexec/emboss/coderet
- /usr/local/libexec/emboss/compseq
- /usr/local/libexec/emboss/cons
- /usr/local/libexec/emboss/consambig
- /usr/local/libexec/emboss/cpgplot
- /usr/local/libexec/emboss/cpgreport
- /usr/local/libexec/emboss/cusp
- /usr/local/libexec/emboss/cutgextract
- /usr/local/libexec/emboss/cutseq
- /usr/local/libexec/emboss/dan
- /usr/local/libexec/emboss/dbiblast
- /usr/local/libexec/emboss/dbifasta
- /usr/local/libexec/emboss/dbiflat
- /usr/local/libexec/emboss/dbigcg
- /usr/local/libexec/emboss/dbxfasta
- /usr/local/libexec/emboss/dbxflat
- /usr/local/libexec/emboss/dbxgcg
- /usr/local/libexec/emboss/degapseq
- /usr/local/libexec/emboss/density
- /usr/local/libexec/emboss/descseq
- /usr/local/libexec/emboss/diffseq
- /usr/local/libexec/emboss/digest
- /usr/local/libexec/emboss/distmat
- /usr/local/libexec/emboss/dotmatcher
- /usr/local/libexec/emboss/dotpath
- /usr/local/libexec/emboss/dottup
- /usr/local/libexec/emboss/dreg
- /usr/local/libexec/emboss/edialign
- /usr/local/libexec/emboss/einverted
- /usr/local/libexec/emboss/embossdata
- /usr/local/libexec/emboss/embossversion
- /usr/local/libexec/emboss/emma
- /usr/local/libexec/emboss/emowse
- /usr/local/libexec/emboss/entret
- /usr/local/libexec/emboss/epestfind
- /usr/local/libexec/emboss/eprimer3
- /usr/local/libexec/emboss/equicktandem
- /usr/local/libexec/emboss/est2genome
- /usr/local/libexec/emboss/etandem
- /usr/local/libexec/emboss/extractalign
- /usr/local/libexec/emboss/extractfeat
- /usr/local/libexec/emboss/extractseq
- /usr/local/libexec/emboss/featcopy
- /usr/local/libexec/emboss/featreport
- /usr/local/libexec/emboss/findkm
- /usr/local/libexec/emboss/freak
- /usr/local/libexec/emboss/fuzznuc
- /usr/local/libexec/emboss/fuzzpro
- /usr/local/libexec/emboss/fuzztran
- /usr/local/libexec/emboss/garnier
- /usr/local/libexec/emboss/geecee
- /usr/local/libexec/emboss/getorf
- /usr/local/libexec/emboss/helixturnhelix
- /usr/local/libexec/emboss/hmoment
- /usr/local/libexec/emboss/iep
- /usr/local/libexec/emboss/infoalign
- /usr/local/libexec/emboss/infobase
- /usr/local/libexec/emboss/inforesidue
- /usr/local/libexec/emboss/infoseq
- /usr/local/libexec/emboss/isochore
- /usr/local/libexec/emboss/jaspextract
- /usr/local/libexec/emboss/jaspscan
- /usr/local/libexec/emboss/jembossctl
- /usr/local/libexec/emboss/lindna
- /usr/local/libexec/emboss/listor
- /usr/local/libexec/emboss/makenucseq
- /usr/local/libexec/emboss/makeprotseq
- /usr/local/libexec/emboss/marscan
- /usr/local/libexec/emboss/maskambignuc
- /usr/local/libexec/emboss/maskambigprot
- /usr/local/libexec/emboss/maskfeat
- /usr/local/libexec/emboss/maskseq
- /usr/local/libexec/emboss/matcher
- /usr/local/libexec/emboss/megamerger
- /usr/local/libexec/emboss/merger
- /usr/local/libexec/emboss/msbar
- /usr/local/libexec/emboss/mwcontam
- /usr/local/libexec/emboss/mwfilter
- /usr/local/libexec/emboss/needle
- /usr/local/libexec/emboss/newcpgreport
- /usr/local/libexec/emboss/newcpgseek
- /usr/local/libexec/emboss/newseq
- /usr/local/libexec/emboss/nohtml
- /usr/local/libexec/emboss/noreturn
- /usr/local/libexec/emboss/nospace
- /usr/local/libexec/emboss/notab
- /usr/local/libexec/emboss/notseq
- /usr/local/libexec/emboss/nthseq
- /usr/local/libexec/emboss/octanol
- /usr/local/libexec/emboss/oddcomp
- /usr/local/libexec/emboss/palindrome
- /usr/local/libexec/emboss/pasteseq
- /usr/local/libexec/emboss/patmatdb
- /usr/local/libexec/emboss/patmatmotifs
- /usr/local/libexec/emboss/pepcoil
- /usr/local/libexec/emboss/pepinfo
- /usr/local/libexec/emboss/pepnet
- /usr/local/libexec/emboss/pepstats
- /usr/local/libexec/emboss/pepwheel
- /usr/local/libexec/emboss/pepwindow
- /usr/local/libexec/emboss/pepwindowall
- /usr/local/libexec/emboss/plotcon
- /usr/local/libexec/emboss/plotorf
- /usr/local/libexec/emboss/polydot
- /usr/local/libexec/emboss/preg
- /usr/local/libexec/emboss/prettyplot
- /usr/local/libexec/emboss/prettyseq
- /usr/local/libexec/emboss/primersearch
- /usr/local/libexec/emboss/printsextract
- /usr/local/libexec/emboss/profit
- /usr/local/libexec/emboss/prophecy
- /usr/local/libexec/emboss/prophet
- /usr/local/libexec/emboss/prosextract
- /usr/local/libexec/emboss/pscan
- /usr/local/libexec/emboss/psiphi
- /usr/local/libexec/emboss/rebaseextract
- /usr/local/libexec/emboss/recoder
- /usr/local/libexec/emboss/redata
- /usr/local/libexec/emboss/remap
- /usr/local/libexec/emboss/restover
- /usr/local/libexec/emboss/restrict
- /usr/local/libexec/emboss/revseq
- /usr/local/libexec/emboss/runJemboss.csh
- /usr/local/libexec/emboss/seealso
- /usr/local/libexec/emboss/seqmatchall
- /usr/local/libexec/emboss/seqret
- /usr/local/libexec/emboss/seqretsplit
- /usr/local/libexec/emboss/showalign
- /usr/local/libexec/emboss/showdb
- /usr/local/libexec/emboss/showfeat
- /usr/local/libexec/emboss/showorf
- /usr/local/libexec/emboss/showseq
- /usr/local/libexec/emboss/shuffleseq
- /usr/local/libexec/emboss/sigcleave
- /usr/local/libexec/emboss/silent
- /usr/local/libexec/emboss/sirna
- /usr/local/libexec/emboss/sixpack
- /usr/local/libexec/emboss/sizeseq
- /usr/local/libexec/emboss/skipredundant
- /usr/local/libexec/emboss/skipseq
- /usr/local/libexec/emboss/splitter
- /usr/local/libexec/emboss/stretcher
- /usr/local/libexec/emboss/stssearch
- /usr/local/libexec/emboss/supermatcher
- /usr/local/libexec/emboss/syco
- /usr/local/libexec/emboss/tcode
- /usr/local/libexec/emboss/textsearch
- /usr/local/libexec/emboss/tfextract
- /usr/local/libexec/emboss/tfm
- /usr/local/libexec/emboss/tfscan
- /usr/local/libexec/emboss/tmap
- /usr/local/libexec/emboss/tranalign
- /usr/local/libexec/emboss/transeq
- /usr/local/libexec/emboss/trimest
- /usr/local/libexec/emboss/trimseq
- /usr/local/libexec/emboss/trimspace
- /usr/local/libexec/emboss/twofeat
- /usr/local/libexec/emboss/union
- /usr/local/libexec/emboss/vectorstrip
- /usr/local/libexec/emboss/water
- /usr/local/libexec/emboss/whichdb
- /usr/local/libexec/emboss/wobble
- /usr/local/libexec/emboss/wordcount
- /usr/local/libexec/emboss/wordfinder
- /usr/local/libexec/emboss/wordmatch
- /usr/local/libexec/emboss/wossname
- /usr/local/libexec/emboss/yank
- /usr/local/share/EMBOSS/
- /usr/local/share/EMBOSS/acd/
- /usr/local/share/EMBOSS/acd/aaindexextract.acd
- /usr/local/share/EMBOSS/acd/abiview.acd
- /usr/local/share/EMBOSS/acd/acdc.acd
- /usr/local/share/EMBOSS/acd/acdlog.acd
- /usr/local/share/EMBOSS/acd/acdpretty.acd
- /usr/local/share/EMBOSS/acd/acdtable.acd
- /usr/local/share/EMBOSS/acd/acdtrace.acd
- /usr/local/share/EMBOSS/acd/acdvalid.acd
- /usr/local/share/EMBOSS/acd/ajbad.acd
- /usr/local/share/EMBOSS/acd/ajfeatest.acd
- /usr/local/share/EMBOSS/acd/ajtest.acd
- /usr/local/share/EMBOSS/acd/aligncopy.acd
- /usr/local/share/EMBOSS/acd/aligncopypair.acd
- /usr/local/share/EMBOSS/acd/antigenic.acd
- /usr/local/share/EMBOSS/acd/backtranambig.acd
- /usr/local/share/EMBOSS/acd/backtranseq.acd
- /usr/local/share/EMBOSS/acd/banana.acd
- /usr/local/share/EMBOSS/acd/biosed.acd
- /usr/local/share/EMBOSS/acd/btwisted.acd
- /usr/local/share/EMBOSS/acd/cai.acd
- /usr/local/share/EMBOSS/acd/chaos.acd
- /usr/local/share/EMBOSS/acd/charge.acd
- /usr/local/share/EMBOSS/acd/checktrans.acd
- /usr/local/share/EMBOSS/acd/chips.acd
- /usr/local/share/EMBOSS/acd/cirdna.acd
- /usr/local/share/EMBOSS/acd/codcmp.acd
- /usr/local/share/EMBOSS/acd/codcopy.acd
- /usr/local/share/EMBOSS/acd/coderet.acd
- /usr/local/share/EMBOSS/acd/codes.english
- /usr/local/share/EMBOSS/acd/complex.acd
- /usr/local/share/EMBOSS/acd/compseq.acd
- /usr/local/share/EMBOSS/acd/cons.acd
- /usr/local/share/EMBOSS/acd/consambig.acd
- /usr/local/share/EMBOSS/acd/corbatest.acd
- /usr/local/share/EMBOSS/acd/cpgplot.acd
- /usr/local/share/EMBOSS/acd/cpgreport.acd
- /usr/local/share/EMBOSS/acd/cusp.acd
- /usr/local/share/EMBOSS/acd/cutgextract.acd
- /usr/local/share/EMBOSS/acd/cutseq.acd
- /usr/local/share/EMBOSS/acd/dan.acd
- /usr/local/share/EMBOSS/acd/dbiblast.acd
- /usr/local/share/EMBOSS/acd/dbifasta.acd
- /usr/local/share/EMBOSS/acd/dbiflat.acd
- /usr/local/share/EMBOSS/acd/dbigcg.acd
- /usr/local/share/EMBOSS/acd/dbxfasta.acd
- /usr/local/share/EMBOSS/acd/dbxflat.acd
- /usr/local/share/EMBOSS/acd/dbxgcg.acd
- /usr/local/share/EMBOSS/acd/dbxstat.acd
- /usr/local/share/EMBOSS/acd/degapseq.acd
- /usr/local/share/EMBOSS/acd/density.acd
- /usr/local/share/EMBOSS/acd/descseq.acd
- /usr/local/share/EMBOSS/acd/diffseq.acd
- /usr/local/share/EMBOSS/acd/digest.acd
- /usr/local/share/EMBOSS/acd/distmat.acd
- /usr/local/share/EMBOSS/acd/dotmatcher.acd
- /usr/local/share/EMBOSS/acd/dotpath.acd
- /usr/local/share/EMBOSS/acd/dottup.acd
- /usr/local/share/EMBOSS/acd/dreg.acd
- /usr/local/share/EMBOSS/acd/edialign.acd
- /usr/local/share/EMBOSS/acd/einverted.acd
- /usr/local/share/EMBOSS/acd/embossdata.acd
- /usr/local/share/EMBOSS/acd/embossversion.acd
- /usr/local/share/EMBOSS/acd/emma.acd
- /usr/local/share/EMBOSS/acd/emowse.acd
- /usr/local/share/EMBOSS/acd/entrails.acd
- /usr/local/share/EMBOSS/acd/entret.acd
- /usr/local/share/EMBOSS/acd/epestfind.acd
- /usr/local/share/EMBOSS/acd/eprimer3.acd
- /usr/local/share/EMBOSS/acd/equicktandem.acd
- /usr/local/share/EMBOSS/acd/est2genome.acd
- /usr/local/share/EMBOSS/acd/etandem.acd
- /usr/local/share/EMBOSS/acd/extractalign.acd
- /usr/local/share/EMBOSS/acd/extractfeat.acd
- /usr/local/share/EMBOSS/acd/extractseq.acd
- /usr/local/share/EMBOSS/acd/featcopy.acd
- /usr/local/share/EMBOSS/acd/featreport.acd
- /usr/local/share/EMBOSS/acd/findkm.acd
- /usr/local/share/EMBOSS/acd/freak.acd
- /usr/local/share/EMBOSS/acd/fuzznuc.acd
- /usr/local/share/EMBOSS/acd/fuzzpro.acd
- /usr/local/share/EMBOSS/acd/fuzztran.acd
- /usr/local/share/EMBOSS/acd/garnier.acd
- /usr/local/share/EMBOSS/acd/geecee.acd
- /usr/local/share/EMBOSS/acd/getorf.acd
- /usr/local/share/EMBOSS/acd/giep.acd
- /usr/local/share/EMBOSS/acd/groups.standard
- /usr/local/share/EMBOSS/acd/helixturnhelix.acd
- /usr/local/share/EMBOSS/acd/histogramtest.acd
- /usr/local/share/EMBOSS/acd/hmoment.acd
- /usr/local/share/EMBOSS/acd/iep.acd
- /usr/local/share/EMBOSS/acd/infoalign.acd
- /usr/local/share/EMBOSS/acd/infoseq.acd
- /usr/local/share/EMBOSS/acd/intconv.acd
- /usr/local/share/EMBOSS/acd/isochore.acd
- /usr/local/share/EMBOSS/acd/jaspextract.acd
- /usr/local/share/EMBOSS/acd/jaspscan.acd
- /usr/local/share/EMBOSS/acd/keywords.standard
- /usr/local/share/EMBOSS/acd/knowntypes.standard
- /usr/local/share/EMBOSS/acd/lindna.acd
- /usr/local/share/EMBOSS/acd/listor.acd
- /usr/local/share/EMBOSS/acd/makenucseq.acd
- /usr/local/share/EMBOSS/acd/makeprotseq.acd
- /usr/local/share/EMBOSS/acd/marscan.acd
- /usr/local/share/EMBOSS/acd/maskambignuc.acd
- /usr/local/share/EMBOSS/acd/maskambigprot.acd
- /usr/local/share/EMBOSS/acd/maskfeat.acd
- /usr/local/share/EMBOSS/acd/maskseq.acd
- /usr/local/share/EMBOSS/acd/matcher.acd
- /usr/local/share/EMBOSS/acd/megamerger.acd
- /usr/local/share/EMBOSS/acd/merger.acd
- /usr/local/share/EMBOSS/acd/msbar.acd
- /usr/local/share/EMBOSS/acd/mwcontam.acd
- /usr/local/share/EMBOSS/acd/mwfilter.acd
- /usr/local/share/EMBOSS/acd/needle.acd
- /usr/local/share/EMBOSS/acd/newcoils.acd
- /usr/local/share/EMBOSS/acd/newcpgreport.acd
- /usr/local/share/EMBOSS/acd/newcpgseek.acd
- /usr/local/share/EMBOSS/acd/newseq.acd
- /usr/local/share/EMBOSS/acd/nohtml.acd
- /usr/local/share/EMBOSS/acd/noreturn.acd
- /usr/local/share/EMBOSS/acd/nospace.acd
- /usr/local/share/EMBOSS/acd/notab.acd
- /usr/local/share/EMBOSS/acd/notseq.acd
- /usr/local/share/EMBOSS/acd/nthseq.acd
- /usr/local/share/EMBOSS/acd/octanol.acd
- /usr/local/share/EMBOSS/acd/oddcomp.acd
- /usr/local/share/EMBOSS/acd/origsplitter.acd
- /usr/local/share/EMBOSS/acd/origunion.acd
- /usr/local/share/EMBOSS/acd/palindrome.acd
- /usr/local/share/EMBOSS/acd/pasteseq.acd
- /usr/local/share/EMBOSS/acd/patmatdb.acd
- /usr/local/share/EMBOSS/acd/patmatmotifs.acd
- /usr/local/share/EMBOSS/acd/patmattest.acd
- /usr/local/share/EMBOSS/acd/pepcoil.acd
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